That's what I found. It's a hack to automate editing of the fonts.conf file. I've done that, and it works, more or less.
I also found this, a Gentoo Linux page that describes where to put local.conf, and shows how to enable and disable individual fonts.
https://wiki.gentoo.org/wiki/FontconfigAnd another old linux page with a bunch of local.conf examples. In these examples, one can ADD font folders to local.conf, but can't REMOVE them. And gimp setup adds the windows folders on every update. And all those pages mention that fontconfig documentation is sparse.
If I can't find anything better, I'll just use a batch mode text editor to add and remove the windows font folders from fonts.conf, and have batch files to start gim with and without windows fonts. I'd rather have it outside gimp myself, but if you needed it THAT often, and if gimp rescanned the fonts when you hit the toggle. a plugin toggle would be cool.
Ultimately the entire PURPOSE of fontconfig is something I don't, in general, want done. "The intent is to make font configurations relatively static, and shared by as many applications as possible." I don't want all my specialist fonts available to all my software, and I don't want the system to substitute for missing fonts, or guess at what it thinks might be close, but to tell me they're missing and let me choose a substitute. So I really don't expect to get it to do what I want.